Index

A

active_name (tomviz.dataset.Dataset property) active_scalars (tomviz.dataset.Dataset property) AddConstant (built-in class) AddPoissonNoise (built-in class)

apply_to_each_array() (in module tomviz.utils) AutoCenterOfMassTiltImageAlignment (built-in class) AutoCrossCorrelationTiltImageAlignment (built-in class) AutoTiltAxisRotationAlignment (built-in class) AutoTiltAxisShiftAlignment (built-in class)

B

BinaryClose (built-in class) BinaryDilate (built-in class) BinaryErode (built-in class)

BinaryMinMaxCurvatureFlow (built-in class) BinaryOpen (built-in class) BinaryThreshold (built-in class)

C

CancelableOperator (class in tomviz.operators) canceled (tomviz.operators.CancelableOperator property) CircleMask (built-in class) ClipEdges (built-in class)

CompletableOperator (class in tomviz.operators) completed (tomviz.operators.CompletableOperator property) ConnectedComponents (built-in class) create_child_dataset() (tomviz.dataset.Dataset method)

D

dark (tomviz.dataset.Dataset property) Dataset (class in tomviz.dataset) DeconvolutionDenoise (built-in class)

DeleteSlices (built-in class) depad_array() (in module tomviz.utils) DummyMolecule (built-in class)

E

ElastixRegistration (built-in class)

F

file_name (tomviz.dataset.Dataset property)

FourierShellCorrelation (built-in class)

G

GaussianFilter (built-in class)

GaussianFilterTiltSeries (built-in class) GenerateTiltSeries (built-in class)

L

LabelObjectAttributes (built-in class)

LabelObjectDistanceFromPrincipalAxis (built-in class) LabelObjectPrincipalAxes (built-in class)

M

make_spreadsheet() (in module tomviz.utils) ManualManipulation (built-in class) maximum (tomviz.operators.Progress property) MedianFilter (built-in class)

message (tomviz.operators.Progress property) metadata (tomviz.dataset.Dataset property) module tomviz.operators tomviz.utils

N

num_scalars (tomviz.dataset.Dataset property)

O

Operator (class in tomviz.operators)

OtsuMultipleThreshold (built-in class)

P

pad_array() (in module tomviz.utils) Pad_Data (built-in class) PeronaMalikAnisotropicDiffusion (built-in class)

PoreSizeDistribution (built-in class) PowerSpectrumDensity (built-in class) Progress (class in tomviz.operators) PyStackRegImageAlignment (built-in class)

R

Recon_DFT (built-in class) Recon_DFT_constraint (built-in class) Recon_SIRT (built-in class) Recon_tomopy (built-in class) remove_scalars() (tomviz.dataset.Dataset method)

RemoveArrays (built-in class) Resample (built-in class) Rotate3D (built-in class) rotate_shape() (in module tomviz.utils) RotationAlign (built-in class)

S

scalars() (tomviz.dataset.Dataset method) scalars_names (tomviz.dataset.Dataset property) scan_ids (tomviz.dataset.Dataset property) SegmentParticles (built-in class) SegmentPores (built-in class) set_scalars() (tomviz.dataset.Dataset method)

Shift3D (built-in class) Shift_Stack_Uniformly (built-in class) ShiftRotationCenter_tomopy (built-in class) ShiftTiltSeriesRandomly (built-in class) SimilarityMetrics (built-in class) spacing (tomviz.dataset.Dataset property) SwapAxes (built-in class)

T

tilt_angles (tomviz.dataset.Dataset property) tilt_axis (tomviz.dataset.Dataset property) tomviz.operators module tomviz.utils module Tortuosity (built-in class) transform() (AddConstant method) (AddPoissonNoise method) (AutoCenterOfMassTiltImageAlignment method) (AutoCrossCorrelationTiltImageAlignment method) (AutoTiltAxisRotationAlignment method) (AutoTiltAxisShiftAlignment method) (BinaryClose method) (BinaryDilate method) (BinaryErode method) (BinaryMinMaxCurvatureFlow method) (BinaryOpen method) (BinaryThreshold method) (CircleMask method) (ClipEdges method) (ConnectedComponents method) (DeconvolutionDenoise method) (DeleteSlices method) (DummyMolecule method) (ElastixRegistration method) (FourierShellCorrelation method) (GaussianFilter method) (GaussianFilterTiltSeries method) (GenerateTiltSeries method) (LabelObjectAttributes method) (LabelObjectDistanceFromPrincipalAxis method) (LabelObjectPrincipalAxes method) (ManualManipulation method) (MedianFilter method) (OtsuMultipleThreshold method) (Pad_Data method) (PeronaMalikAnisotropicDiffusion method) (PoreSizeDistribution method) (PowerSpectrumDensity method) (PyStackRegImageAlignment method) (Recon_DFT method) (Recon_DFT_constraint method) (Recon_SIRT method) (Recon_tomopy method) (RemoveArrays method) (Resample method) (Rotate3D method) (RotationAlign method) (SegmentParticles method) (SegmentPores method) (Shift3D method) (Shift_Stack_Uniformly method) (ShiftRotationCenter_tomopy method) (ShiftTiltSeriesRandomly method) (SimilarityMetrics method) (SwapAxes method) (Tortuosity method) (TV_Filter method) (UnsharpMask method) (WienerFilter method)

TV_Filter (built-in class)

U

UnsharpMask (built-in class)

V

value (tomviz.operators.Progress property)

W

white (tomviz.dataset.Dataset property)

WienerFilter (built-in class)

Z

zoom_shape() (in module tomviz.utils)